DQC, call rates, and percent heterozygosity were calculated using 62K SNP chip array genotyping data on 95 pigeonpea genotypes.
S. no. Sample name DQC Call rate (%) Heterozygosity (%) Homozygosity (%) Reference
1        AKCMS-11A 0.96 99.38 16.23 83.77 https://doi.org/10.1038/s41598-020-61889-0
2        AKCMS-11B 0.95 99.37 14.09 85.91  
3        AKCMS-13A 0.98 99.8 12.38 87.62  
4        AKCMS-13B 0.96 99.28 7.11 92.89  
5        AKPHM-11303 0.99 99.71 5.16 94.84  
6        AKPR-303 0.98 99.59 6.22 93.78  
7        Asha 0.96 99.16 16.84 83.16  
8        Asha Dwarf 0.97 99.06 5.57 94.43  
9        B-DG11115 0.98 99.73 9.87 90.13  
10     Bahar 0.98 99.73 5.76 94.24  
11     BDN2029 0.95 98.07 11.72 88.28  
12     BDN708 0.98 99.78 5.36 94.64  
13     BRG-2 0.97 99.27 7.93 92.07  
14     BSMR-853 0.98 99.73 7.31 92.7  
15     BSMR846 0.96 99.32 11.22 88.78  
16     CO 5 0.98 99.66 5.85 94.15  
17     DG(Rg)-15 0.99 99.68 5.41 94.59  
18     DG(Rg)-16 0.99 99.71 11.17 88.83  
19     DG(Rg)-23 0.99 99.8 5.55 94.45  
20     DG(Rg)-24 0.97 94.47 7 93  
21     DG(Rg)-26 0.99 99.86 11.24 88.76  
22     DG(Rg)-27 0.99 99.04 13.16 86.84  
23     DG(Rg)-29 0.97 99.68 14.61 85.39  
24     DG(Rg)-3 0.99 99.75 12.9 87.1  
25     DG(Rg)-38 0.98 99.15 7.23 92.78  
26     DG(Rg)-39 0.99 99.75 14.44 85.56  
27     DG(Rg)-40 0.98 99.78 8.52 91.48  
28     DG(Rg)-41 0.99 99.8 6.73 93.27  
29     DG(Rg)-42 0.99 99.62 7.16 92.84  
30     DG(Rg)-44 0.99 99.75 10.73 89.28  
31     DG(Rg)-45 0.99 99.76 7.51 92.49  
32     DG(Rg)-46 0.98 99.76 7.16 92.84  
33     DG(Rg)-47 0.99 99.59 7.27 92.73  
34     DG(Rg)-48 0.98 99.65 5.16 94.84  
35     DG(Rg)-51 0.98 99.77 14.05 85.95  
36     DG(Rg)-52 0.98 99.71 7.5 92.5  
37     DG(Rg)-53 0.99 99.73 8.26 91.74  
38     DG(Rg)-54 0.98 99.64 6.06 93.94  
39     DG(Rg)-55 0.99 99.85 12.78 87.22  
40     DG(Rg)-56 0.99 99.78 13.14 86.86  
41     DG(Rg)-58 0.98 99.69 9.89 90.11  
42     Dholi Dwarf 0.98 99.76 5.57 94.43  
43     EC13693 0.99 99.81 6.32 93.68  
44     EC151154 0.99 99.77 14.51 85.49  
45     EC528314 0.99 99.71 12.18 87.82  
46     EC528321 0.99 99.48 11.23 88.77  
47     EC528322 0.99 99.61 11.33 88.67  
48     H2001-4 0.93 98.67 14.63 85.37  
49     IC33671 0.98 98.08 10.79 89.21  
50     IC387061 0.99 99.83 10.84 89.16  
51     IC43534 0.98 99.63 6.84 93.16  
52     ICP11512 0.99 91.59 15.23 84.77  
53     ICP15054 0.97 99.72 11.07 88.93  
54     ICP15335 0.98 99.72 9.34 90.66  
55     ICP15350 0.98 99.59 12.47 87.53  
56     ICP15354 0.99 99.85 14.46 85.54  
57     ICP16451 0.98 99.41 14.02 85.98  
58     ICP16675 0.99 99.73 12.42 87.58  
59     ICPH-7 0.98 99.77 5.41 94.59  
60     ICPL-84023 0.96 98.82 10.34 89.66  
61     ICPL20325 0.93 98.15 13.2 86.8  
62     ICPL2039 0.98 99.66 5.48 94.52  
63     ICPL88034 0.96 99.63 13.85 86.15  
64     ICPX060131 0.97 99.7 6.57 93.44  
65     JKM-189 0.99 99.32 7.9 92.1  
66     LRG 141 0.98 99.68 14.01 85.99  
67     LRG 30 0.98 99.74 5.09 94.91  
68     LRG 38 0.96 98.35 10.55 89.45  
69     MAL 6 0.97 99.59 6.34 93.66  
70     MAL 13 0.99 99.04 9.19 90.82  
71     MAL 18 0.97 98.48 10.54 89.47  
72     MAPTH-1 0.99 99.51 5.75 94.25  
73     Maruti 0.98 99.59 6.17 93.83  
74     PS-5225 0.98 99.75 7.07 92.93  
75     PAE-9-569 0.95 99.63 12.66 87.34  
76     PAE-II-21 0.92 98.22 13.45 86.56  
77     PDF-EE 0.99 99.84 13.56 86.45  
78     Pusa 2001 0.98 99.74 7.95 92.05  
79     Pusa 2002 0.95 98.42 12.22 87.78  
80     Pusa 2012-1 0.99 99.89 11.51 88.49  
81     Pusa 991 0.97 93.26 15.8 84.2  
82     Pusa 992 0.98 99.76 8.77 91.23  
83     Pusa Dwarf 0.99 99.75 5.42 94.58  
84     T-10-9 0.98 99.77 9.89 90.11  
85     T-13-4 0.98 99.7 5.28 94.72  
86     T-14-18 0.97 99.53 15.44 84.56  
87     T-17-12 0.99 99.75 7.08 92.92  
88     T-7-5 0.99 99.8 8.38 91.62  
89     T-87-2 0.97 99.6 8.05 91.95  
90     T-95-4 0.97 99.64 4.89 95.11  
91     U11-34 0.98 99.87 9.06 90.94  
92     U1180 0.98 98.64 11.86 88.14  
93     Vipula 0.98 95.84 17.7 82.31  
94     WRG-53 0.99 99.66 5.81 94.19  
95     WRP-27 0.98 99.77 11.61 88.39